Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 MIR6727-201ENST00000620702 65 ntBASIC15.3■□□□□ 0.04
EBF1Q9UH73 AP001002.3-201ENST00000623482 206 ntBASIC15.3■□□□□ 0.04
EBF1Q9UH73 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 AC128714.1-201ENST00000637035 887 ntBASIC15.3■□□□□ 0.04
EBF1Q9UH73 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.29■□□□□ 0.04
EBF1Q9UH73 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 AL391280.1-201ENST00000506969 1062 ntBASIC15.29■□□□□ 0.04
EBF1Q9UH73 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 AC005740.2-201ENST00000511085 419 ntBASIC15.29■□□□□ 0.04
EBF1Q9UH73 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 RN7SL774P-201ENST00000577467 290 ntBASIC15.29■□□□□ 0.04
EBF1Q9UH73 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.29■□□□□ 0.04
EBF1Q9UH73 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EBF1Q9UH73 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 SSR4P1-203ENST00000599569 2260 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 KRT8P4-201ENST00000509735 1454 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AL136309.1-201ENST00000403917 691 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 Z97180.1-201ENST00000445173 988 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 AC100850.1-201ENST00000506768 649 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 AC022217.1-201ENST00000521069 738 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 AC106820.3-201ENST00000561653 397 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms