Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.13□□□□□ -0.15
CTSFQ9UBX1 AL136309.1-201ENST00000403917 691 ntBASIC14.13□□□□□ -0.15
CTSFQ9UBX1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 HSPB1P2-201ENST00000448722 546 ntBASIC14.13□□□□□ -0.15
CTSFQ9UBX1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 AC138696.2-201ENST00000607376 223 ntBASIC14.13□□□□□ -0.15
CTSFQ9UBX1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 MIR6787-201ENST00000616675 61 ntBASIC14.13□□□□□ -0.15
CTSFQ9UBX1 AC023090.2-201ENST00000625182 2110 ntBASIC14.13□□□□□ -0.15
CTSFQ9UBX1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 RN7SKP175-201ENST00000408472 289 ntBASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AC004945.1-201ENST00000416738 983 ntBASIC14.12□□□□□ -0.15
CTSFQ9UBX1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 CHMP1AP1-201ENST00000445563 662 ntBASIC14.12□□□□□ -0.15
CTSFQ9UBX1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ZNF767P-206ENST00000513792 565 ntBASIC14.12□□□□□ -0.15
CTSFQ9UBX1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AC244093.1-201ENST00000610837 814 ntBASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AC244157.2-201ENST00000616239 1006 ntBASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AP001002.3-201ENST00000623482 206 ntBASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AL008638.5-201ENST00000623814 1298 ntBASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSFQ9UBX1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.11□□□□□ -0.15
CTSFQ9UBX1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms