Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15□□□□□ -0.01
SPASTQ9UBP0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15□□□□□ -0.01
SPASTQ9UBP0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15□□□□□ -0.01
SPASTQ9UBP0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15□□□□□ -0.01
SPASTQ9UBP0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15□□□□□ -0.01
SPASTQ9UBP0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15□□□□□ -0.01
SPASTQ9UBP0 CD74-212ENST00000524315 584 ntTSL 5 BASIC15□□□□□ -0.01
SPASTQ9UBP0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15□□□□□ -0.01
SPASTQ9UBP0 SAMD11P1-201ENST00000571429 661 ntBASIC15□□□□□ -0.01
SPASTQ9UBP0 AC244093.1-201ENST00000610837 814 ntBASIC15□□□□□ -0.01
SPASTQ9UBP0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15□□□□□ -0.01
SPASTQ9UBP0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15□□□□□ -0.01
SPASTQ9UBP0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SPASTQ9UBP0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 C18orf15-201ENST00000623680 2534 ntBASIC15□□□□□ -0.01
SPASTQ9UBP0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SPASTQ9UBP0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SPASTQ9UBP0 KRT8P14-201ENST00000414254 1442 ntBASIC15□□□□□ -0.01
SPASTQ9UBP0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15□□□□□ -0.01
SPASTQ9UBP0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SPASTQ9UBP0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 AC099548.2-209ENST00000480264 625 ntBASIC14.99□□□□□ -0.01
SPASTQ9UBP0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 MIR4741-201ENST00000579822 90 ntBASIC14.99□□□□□ -0.01
SPASTQ9UBP0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 ENPP7P14-201ENST00000621765 1040 ntBASIC14.99□□□□□ -0.01
SPASTQ9UBP0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.99□□□□□ -0.01
SPASTQ9UBP0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms