Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 AC090164.2-201ENST00000611487 516 ntBASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 AC007292.2-201ENST00000593524 1812 ntBASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 AC008132.1-202ENST00000342005 1389 ntBASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 ST13P19-201ENST00000442505 1124 ntBASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 BX088702.1-201ENST00000610784 235 ntBASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 AP001505.2-201ENST00000616815 443 ntBASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 PUDPP3-201ENST00000445368 636 ntBASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
KIAA1549Q9HCM3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 AC232323.1-201ENST00000540724 2099 ntBASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
KIAA1549Q9HCM3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 DPM3-202ENST00000368399 517 ntBASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 PDIA3P2-201ENST00000428073 158 ntBASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 VDAC1P1-201ENST00000439229 848 ntBASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.2□□□□□ -0.3
KIAA1549Q9HCM3 RBM8B-201ENST00000555532 525 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms