Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 AC106820.3-201ENST00000561653 397 ntBASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 PPY2P-201ENST00000582808 702 ntBASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPAP1Q9BWH6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RPAP1Q9BWH6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 AC007686.3-201ENST00000619017 3487 ntBASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms