Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AP001063.1-201ENST00000568332 529 ntBASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AL512343.1-201ENST00000605837 169 ntBASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AC025181.2-201ENST00000606994 802 ntBASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 C18orf15-201ENST00000623680 2534 ntBASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AC126335.2-201ENST00000623362 4637 ntBASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 CR383656.2-201ENST00000548656 2254 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC134312.5-201ENST00000568031 1313 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC232323.1-201ENST00000540724 2099 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 REXO1L5P-201ENST00000622260 2098 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 USP32P1-208ENST00000506594 1164 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 CLUHP6-201ENST00000580789 941 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 RPSAP52-203ENST00000622976 1023 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC005252.2-201ENST00000624630 1141 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC084364.1-201ENST00000551967 1556 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 AC005912.2-201ENST00000619492 2400 ntBASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms