Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN18Q99952 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PTPN18Q99952 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN18Q99952 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN18Q99952 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN18Q99952 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN18Q99952 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN18Q99952 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.83■□□□□ 0.29
PTPN18Q99952 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN18Q99952 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN18Q99952 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.83■□□□□ 0.29
PTPN18Q99952 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PTPN18Q99952 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PTPN18Q99952 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN18Q99952 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 ERP29P1-201ENST00000442902 706 ntBASIC16.83■□□□□ 0.28
PTPN18Q99952 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 AL135901.1-201ENST00000451812 333 ntBASIC16.83■□□□□ 0.28
PTPN18Q99952 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 AC093826.1-201ENST00000508655 993 ntBASIC16.83■□□□□ 0.28
PTPN18Q99952 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN18Q99952 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN18Q99952 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN18Q99952 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN18Q99952 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN18Q99952 AC009145.4-201ENST00000625119 1294 ntBASIC16.83■□□□□ 0.28
PTPN18Q99952 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.83■□□□□ 0.28
PTPN18Q99952 AL590440.2-201ENST00000641973 1595 ntBASIC16.83■□□□□ 0.28
PTPN18Q99952 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN18Q99952 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PTPN18Q99952 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTPN18Q99952 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN18Q99952 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN18Q99952 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN18Q99952 AP002353.1-201ENST00000528257 1599 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN18Q99952 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 FAM90A21P-201ENST00000510875 1396 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 FAM90A15P-201ENST00000514465 1395 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 FAM90A6P-201ENST00000515148 1394 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 FAM90A16P-201ENST00000526662 1395 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 FAM90A9P-201ENST00000527940 1395 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 FAM90A5P-201ENST00000528738 1395 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 FAM90A14P-201ENST00000530386 1395 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 FAM90A13P-201ENST00000534703 1395 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN18Q99952 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN18Q99952 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN18Q99952 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 RN7SL277P-201ENST00000481521 288 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN18Q99952 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN18Q99952 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN18Q99952 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN18Q99952 CASP16P-204ENST00000635032 809 ntBASIC16.82■□□□□ 0.28
PTPN18Q99952 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PTPN18Q99952 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PTPN18Q99952 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms