Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 MIR4683-201ENST00000579659 81 ntBASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 MIR4538-201ENST00000581377 78 ntBASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AL096828.3-201ENST00000615354 462 ntBASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 SHC1P1-201ENST00000425230 1745 ntBASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AC020910.5-201ENST00000623668 1865 ntBASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AC006033.1-201ENST00000440505 426 ntBASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AC004898.1-201ENST00000451057 766 ntBASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AL023803.2-201ENST00000620080 638 ntBASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AL008638.5-201ENST00000623814 1298 ntBASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK5RAP1Q96SZ6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 DBET-201ENST00000630918 3363 ntBASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
CDK5RAP1Q96SZ6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 AC020907.1-201ENST00000616460 1350 ntBASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 AC099063.4-201ENST00000641099 1602 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms