Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 AC006335.1-201ENST00000445200 547 ntBASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 AC012618.1-201ENST00000461223 412 ntBASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 INE2-201ENST00000630399 1874 ntBASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 E2F3P2-201ENST00000447755 1422 ntBASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNGAP1Q96PV0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 AC234644.1-201ENST00000406065 370 ntBASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 FTLP1-201ENST00000449155 526 ntBASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 RPS2P36-201ENST00000456516 831 ntBASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 AC008825.2-201ENST00000603374 718 ntBASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 AP000346.4-201ENST00000614827 381 ntBASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 AL157791.1-201ENST00000553667 1699 ntBASIC16.96■□□□□ 0.31
SYNGAP1Q96PV0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 RN7SKP230-201ENST00000365642 335 ntBASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 MIR33B-201ENST00000385104 96 ntBASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 SNORD3B-2-202ENST00000571722 791 ntBASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 AC132192.2-201ENST00000596206 1147 ntBASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 AL132994.2-201ENST00000603120 687 ntBASIC16.96■□□□□ 0.3
SYNGAP1Q96PV0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AP000845.1-201ENST00000581677 2131 ntBASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms