Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 RPS8P6-201ENST00000426177 609 ntBASIC11.45□□□□□ -0.58
AP1S3Q96PC3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 FAM8A3P-201ENST00000427218 844 ntBASIC11.45□□□□□ -0.58
AP1S3Q96PC3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 AC093909.1-201ENST00000504731 1122 ntBASIC11.45□□□□□ -0.58
AP1S3Q96PC3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 AC061975.2-201ENST00000581722 295 ntBASIC11.45□□□□□ -0.58
AP1S3Q96PC3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 AL031008.1-201ENST00000619963 541 ntBASIC11.45□□□□□ -0.58
AP1S3Q96PC3 AC073869.1-201ENST00000415574 2762 ntBASIC11.45□□□□□ -0.58
AP1S3Q96PC3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AC002056.1-201ENST00000395613 760 ntBASIC11.44□□□□□ -0.58
AP1S3Q96PC3 RPL5P21-201ENST00000404620 815 ntBASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AC009947.1-201ENST00000444350 727 ntBASIC11.44□□□□□ -0.58
AP1S3Q96PC3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.44□□□□□ -0.58
AP1S3Q96PC3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 AC073389.1-201ENST00000595595 795 ntBASIC11.44□□□□□ -0.58
AP1S3Q96PC3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 SPTSSB-204ENST00000617024 1292 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms