Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
STAG1Q8WVM7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 MRPL37P1-201ENST00000592451 1337 ntBASIC17.59■□□□□ 0.41
STAG1Q8WVM7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 Z93015.1-201ENST00000451718 390 ntBASIC17.59■□□□□ 0.41
STAG1Q8WVM7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 AP001002.3-201ENST00000623482 206 ntBASIC17.59■□□□□ 0.41
STAG1Q8WVM7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
STAG1Q8WVM7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 AC092135.3-201ENST00000624151 1846 ntBASIC17.58■□□□□ 0.41
STAG1Q8WVM7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.58■□□□□ 0.41
STAG1Q8WVM7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 AC010141.1-201ENST00000411585 623 ntBASIC17.58■□□□□ 0.4
STAG1Q8WVM7 AC079178.1-201ENST00000420915 656 ntBASIC17.58■□□□□ 0.4
STAG1Q8WVM7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
STAG1Q8WVM7 AC015818.8-201ENST00000587907 1519 ntBASIC17.57■□□□□ 0.4
STAG1Q8WVM7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 AL136172.1-201ENST00000598590 1394 ntBASIC17.57■□□□□ 0.4
STAG1Q8WVM7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
STAG1Q8WVM7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms