Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
TRAF3IP1Q8TDR0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAF3IP1Q8TDR0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
TRAF3IP1Q8TDR0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAF3IP1Q8TDR0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAF3IP1Q8TDR0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAF3IP1Q8TDR0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAF3IP1Q8TDR0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TRAF3IP1Q8TDR0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AC092552.1-201ENST00000547243 906 ntBASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AL359711.2-201ENST00000563105 872 ntBASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AC133539.2-201ENST00000604757 467 ntBASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AC131212.3-201ENST00000624087 4219 ntBASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAF3IP1Q8TDR0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 KRT8P22-201ENST00000562317 1415 ntBASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AC139749.1-202ENST00000617529 3139 ntBASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AL031595.1-201ENST00000623969 4709 ntBASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AL139094.1-201ENST00000405549 1188 ntBASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 MYCLP2-201ENST00000449268 967 ntBASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms