Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 AL645933.1-201ENST00000440087 609 ntBASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 EIF4HP1-201ENST00000453115 687 ntBASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 HLA-J-204ENST00000495278 958 ntBASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 AC013355.1-201ENST00000562625 723 ntBASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 AC138649.2-201ENST00000615886 705 ntBASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEDD1Q8NHV4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 AC106794.1-201ENST00000506935 792 ntBASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 AC022217.1-201ENST00000521069 738 ntBASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 AC009884.2-201ENST00000603110 324 ntBASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NEDD1Q8NHV4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 MBLAC2-202ENST00000514906 1936 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 TUBBP5-203ENST00000508529 1334 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 AL160314.3-201ENST00000556041 767 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 ACTG1P17-201ENST00000558391 1119 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 SNORD3B-2-202ENST00000571722 791 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 AC005962.1-201ENST00000584100 773 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms