Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 AC007431.3-201ENST00000623221 587 ntBASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00346Q8IVM7 AC018665.1-201ENST00000622927 1362 ntBASIC13.33□□□□□ -0.27
LINC00346Q8IVM7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.33□□□□□ -0.27
LINC00346Q8IVM7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
LINC00346Q8IVM7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00346Q8IVM7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00346Q8IVM7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 AL645937.2-201ENST00000396808 931 ntBASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 AC098850.1-201ENST00000419919 790 ntBASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 SPTLC1P1-201ENST00000447199 261 ntBASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 AC123567.1-201ENST00000548294 1261 ntBASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 AL359711.2-201ENST00000563105 872 ntBASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 AC009118.2-201ENST00000613275 655 ntBASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00346Q8IVM7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00346Q8IVM7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms