Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRC28Q86X40 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRC28Q86X40 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRC28Q86X40 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRC28Q86X40 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LRRC28Q86X40 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRC28Q86X40 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LRRC28Q86X40 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRC28Q86X40 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.43□□□□□ -0.26
LRRC28Q86X40 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 AC009407.1-201ENST00000568958 598 ntBASIC13.43□□□□□ -0.26
LRRC28Q86X40 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 RN7SL204P-201ENST00000582831 262 ntBASIC13.43□□□□□ -0.26
LRRC28Q86X40 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 LINC02084-201ENST00000606069 1096 ntBASIC13.43□□□□□ -0.26
LRRC28Q86X40 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LRRC28Q86X40 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRC28Q86X40 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 BTBD7P1-201ENST00000447253 1453 ntBASIC13.42□□□□□ -0.26
LRRC28Q86X40 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 AC002472.2-201ENST00000442739 958 ntBASIC13.42□□□□□ -0.26
LRRC28Q86X40 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms