Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 AC026410.1-201ENST00000507366 1101 ntBASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 AC007952.4-201ENST00000573866 637 ntBASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 RN7SL665P-201ENST00000578793 300 ntBASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 AC008894.3-201ENST00000624324 3103 ntBASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 ERP29P1-201ENST00000442902 706 ntBASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 AL591471.1-201ENST00000621855 229 ntBASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 BRD7P5-201ENST00000299197 1822 ntBASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC141Q6ZP82 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 AC011270.2-201ENST00000624293 2550 ntBASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 CR383656.3-201ENST00000551315 183 ntBASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 SIGLEC22P-201ENST00000599104 714 ntBASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC141Q6ZP82 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 RN7SKP109-201ENST00000410592 316 ntBASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 MIR5196-201ENST00000578146 115 ntBASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 RN7SL470P-201ENST00000583069 259 ntBASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CCDC141Q6ZP82 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms