Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 NKAPP1-205ENST00000585790 367 ntBASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 AL355877.3-201ENST00000622820 899 ntBASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 AC068760.1-201ENST00000493579 1953 ntBASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 TSPY19P-201ENST00000418461 509 ntBASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 TSPY18P-201ENST00000441642 509 ntBASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 MIR3909-201ENST00000579518 119 ntBASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 MTDHP4-201ENST00000600287 670 ntBASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 AL450472.2-201ENST00000603663 1156 ntBASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 GGTLC5P-201ENST00000617623 998 ntBASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KCNIP4Q6PIL6 AL589702.1-201ENST00000641229 1509 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms