Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 AL132994.1-201ENST00000554098 400 ntBASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 AC140658.4-201ENST00000561990 352 ntBASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 AL118516.1-201ENST00000564152 670 ntBASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 AC012073.1-201ENST00000606114 1108 ntBASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPAQ5VT25 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CDC42BPAQ5VT25 AC018442.1-201ENST00000421439 2061 ntBASIC21.95■■□□□ 1.11
CDC42BPAQ5VT25 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 OR2A1-AS1-210ENST00000496968 531 ntBASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC084752.1-201ENST00000509766 622 ntBASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 SORD2P-201ENST00000558556 1069 ntBASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 CMC2-204ENST00000562713 573 ntTSL 3 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 CMC2-209ENST00000565108 399 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 NDUFB10P1-201ENST00000567319 521 ntBASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC021016.3-201ENST00000608367 477 ntBASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC011471.3-201ENST00000623576 402 ntBASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPAQ5VT25 NHP2-202ENST00000314397 599 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 RPL3P2-204ENST00000413027 1203 ntBASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 TRMT112P3-201ENST00000580149 358 ntBASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AC011247.3-201ENST00000603297 438 ntBASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AC007250.1-201ENST00000608934 338 ntBASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 TP53-221ENST00000615910 1149 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AC019109.1-201ENST00000401725 1874 ntBASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 BCAS2P2-201ENST00000425064 674 ntBASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 HELLS-212ENST00000630929 400 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 AC013268.4-201ENST00000637413 2228 ntBASIC21.94■■□□□ 1.1
CDC42BPAQ5VT25 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 AC064801.2-201ENST00000625052 1303 ntBASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms