Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.48■□□□□ 0.55
RC3H1Q5TC82 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 MIR645-201ENST00000385283 94 ntBASIC18.48■□□□□ 0.55
RC3H1Q5TC82 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.48■□□□□ 0.55
RC3H1Q5TC82 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 RN7SL277P-201ENST00000481521 288 ntBASIC18.48■□□□□ 0.55
RC3H1Q5TC82 RN7SL665P-201ENST00000578793 300 ntBASIC18.48■□□□□ 0.55
RC3H1Q5TC82 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 AC073592.2-201ENST00000623062 780 ntBASIC18.48■□□□□ 0.55
RC3H1Q5TC82 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 AC002472.4-201ENST00000641915 272 ntBASIC18.48■□□□□ 0.55
RC3H1Q5TC82 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.48■□□□□ 0.55
RC3H1Q5TC82 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RC3H1Q5TC82 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 AC092580.1-201ENST00000433998 658 ntBASIC18.47■□□□□ 0.55
RC3H1Q5TC82 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 RN7SL396P-201ENST00000471086 295 ntBASIC18.47■□□□□ 0.55
RC3H1Q5TC82 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 AC068867.1-201ENST00000559855 150 ntBASIC18.47■□□□□ 0.55
RC3H1Q5TC82 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 AL591471.1-201ENST00000621855 229 ntBASIC18.47■□□□□ 0.55
RC3H1Q5TC82 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 OR6D1P-203ENST00000641209 4860 ntBASIC18.47■□□□□ 0.55
RC3H1Q5TC82 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.47■□□□□ 0.55
RC3H1Q5TC82 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RC3H1Q5TC82 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RC3H1Q5TC82 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RC3H1Q5TC82 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.46■□□□□ 0.55
RC3H1Q5TC82 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms