Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 DPM3-202ENST00000368399 517 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 AL390039.1-201ENST00000399148 611 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 TLE1P1-201ENST00000422965 589 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 AC253536.4-201ENST00000440539 267 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 AC005740.2-201ENST00000511085 419 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 ACTR6P1-201ENST00000514311 1104 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 AC100827.2-201ENST00000563214 1194 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 DUX4L46-201ENST00000566845 751 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 AL158050.2-201ENST00000605336 568 ntBASIC15.88■□□□□ 0.13
VARS2Q5ST30 FGA-203ENST00000622532 1130 ntTSL 5 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.88■□□□□ 0.13
VARS2Q5ST30 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 VN1R53P-201ENST00000429536 957 ntBASIC15.87■□□□□ 0.13
VARS2Q5ST30 MTND2P3-201ENST00000452458 470 ntBASIC15.87■□□□□ 0.13
VARS2Q5ST30 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TUBB8P8-201ENST00000458717 1058 ntBASIC15.87■□□□□ 0.13
VARS2Q5ST30 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 U62317.3-201ENST00000608319 855 ntBASIC15.87■□□□□ 0.13
VARS2Q5ST30 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms