Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 AC022616.1-201ENST00000518688 554 ntBASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 AC009486.1-201ENST00000569860 813 ntBASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 OR2I1P-210ENST00000642037 4691 ntBASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HERC4Q5GLZ8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 AC007551.1-201ENST00000457394 519 ntBASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 KRT18P25-201ENST00000508931 1278 ntBASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 AL022328.1-201ENST00000610050 478 ntBASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 MIR6727-201ENST00000620702 65 ntBASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 LRRC59-203ENST00000576448 1531 ntBASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC4Q5GLZ8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 OR2I1P-209ENST00000641730 5365 ntBASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 AC005229.1-201ENST00000392885 409 ntBASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 KRT8P13-201ENST00000463294 1010 ntBASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms