Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.52□□□□□ -0.4
ANKRD55Q3KP44 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 AC004967.1-201ENST00000453589 447 ntBASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 BANF1P1-201ENST00000553684 263 ntBASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 RARRES2P9-201ENST00000565168 469 ntBASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD55Q3KP44 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 NUTM2HP-201ENST00000442076 2498 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 SPDYE17-201ENST00000412399 783 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AC254562.1-201ENST00000417586 456 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms