Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 ZBED1P1-201ENST00000502364 1930 ntBASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 AC144522.1-201ENST00000625111 1658 ntBASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM1Q2M3G4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 OR2K2-202ENST00000374428 1038 ntBASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SHROOM1Q2M3G4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 AC234782.1-201ENST00000451950 919 ntBASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 RPS2P36-201ENST00000456516 831 ntBASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 AC242376.1-201ENST00000559033 726 ntBASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 SPCS2P2-201ENST00000603270 608 ntBASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 AC018635.2-201ENST00000608625 364 ntBASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 AL136295.7-201ENST00000619226 1200 ntBASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 AC128714.1-201ENST00000637035 887 ntBASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHROOM1Q2M3G4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 AC078875.1-201ENST00000431907 724 ntBASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 IGLV3-15-201ENST00000518356 244 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms