Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 AC245884.6-201ENST00000515672 1067 ntBASIC17.76■□□□□ 0.43
PDS5AQ29RF7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 AHCYP4-201ENST00000419201 1315 ntBASIC17.76■□□□□ 0.43
PDS5AQ29RF7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.76■□□□□ 0.43
PDS5AQ29RF7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 TCAF2P1-201ENST00000291129 2421 ntBASIC17.76■□□□□ 0.43
PDS5AQ29RF7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 AJ011931.1-201ENST00000618749 2492 ntBASIC17.76■□□□□ 0.43
PDS5AQ29RF7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDS5AQ29RF7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 AL133466.1-201ENST00000447582 150 ntBASIC17.75■□□□□ 0.43
PDS5AQ29RF7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.75■□□□□ 0.43
PDS5AQ29RF7 NUP210P1-202ENST00000504322 710 ntBASIC17.75■□□□□ 0.43
PDS5AQ29RF7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 AC084346.2-201ENST00000607097 949 ntBASIC17.75■□□□□ 0.43
PDS5AQ29RF7 AF254983.2-201ENST00000612331 135 ntBASIC17.75■□□□□ 0.43
PDS5AQ29RF7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDS5AQ29RF7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 AC007274.2-201ENST00000421675 662 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 PDIA3P2-201ENST00000428073 158 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 Z97180.1-201ENST00000445173 988 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 AL353637.1-201ENST00000451571 732 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 IMP3P2-201ENST00000489760 475 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 AL353770.1-201ENST00000614915 403 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 AC015967.2-201ENST00000624092 234 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms