Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.78□□□□□ -0.2
PUDPQ08623 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PUDPQ08623 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
PUDPQ08623 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.78□□□□□ -0.2
PUDPQ08623 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.78□□□□□ -0.2
PUDPQ08623 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.78□□□□□ -0.2
PUDPQ08623 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.78□□□□□ -0.2
PUDPQ08623 GAPDHP40-201ENST00000505218 1006 ntBASIC13.78□□□□□ -0.2
PUDPQ08623 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.78□□□□□ -0.2
PUDPQ08623 AC055876.2-201ENST00000531834 546 ntBASIC13.78□□□□□ -0.2
PUDPQ08623 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PUDPQ08623 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.78□□□□□ -0.2
PUDPQ08623 AL049840.4-201ENST00000602422 811 ntBASIC13.78□□□□□ -0.2
PUDPQ08623 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 AJ011932.1-201ENST00000621707 465 ntBASIC13.78□□□□□ -0.2
PUDPQ08623 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
PUDPQ08623 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
PUDPQ08623 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 ACE3P-201ENST00000423435 1973 ntBASIC13.78□□□□□ -0.2
PUDPQ08623 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.78□□□□□ -0.2
PUDPQ08623 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PUDPQ08623 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.77□□□□□ -0.2
PUDPQ08623 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.77□□□□□ -0.2
PUDPQ08623 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PUDPQ08623 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.77□□□□□ -0.21
PUDPQ08623 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.77□□□□□ -0.21
PUDPQ08623 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.77□□□□□ -0.21
PUDPQ08623 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.77□□□□□ -0.21
PUDPQ08623 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.77□□□□□ -0.21
PUDPQ08623 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.77□□□□□ -0.21
PUDPQ08623 GNAQP1-201ENST00000444815 1067 ntBASIC13.77□□□□□ -0.21
PUDPQ08623 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.77□□□□□ -0.21
PUDPQ08623 DRD5P1-201ENST00000456605 1438 ntBASIC13.77□□□□□ -0.21
PUDPQ08623 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.77□□□□□ -0.21
PUDPQ08623 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.77□□□□□ -0.21
PUDPQ08623 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.77□□□□□ -0.21
PUDPQ08623 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.77□□□□□ -0.21
PUDPQ08623 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.77□□□□□ -0.21
PUDPQ08623 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms