Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
PRKCDQ05655 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.9□□□□□ -0.19
PRKCDQ05655 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PRKCDQ05655 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
PRKCDQ05655 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.9□□□□□ -0.19
PRKCDQ05655 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PRKCDQ05655 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PRKCDQ05655 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PRKCDQ05655 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
PRKCDQ05655 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.89□□□□□ -0.19
PRKCDQ05655 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
PRKCDQ05655 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.89□□□□□ -0.19
PRKCDQ05655 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.89□□□□□ -0.19
PRKCDQ05655 AC114501.2-201ENST00000439631 535 ntBASIC13.89□□□□□ -0.19
PRKCDQ05655 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.89□□□□□ -0.19
PRKCDQ05655 AC067863.1-201ENST00000494933 530 ntBASIC13.89□□□□□ -0.19
PRKCDQ05655 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.89□□□□□ -0.19
PRKCDQ05655 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PRKCDQ05655 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 AL590560.3-201ENST00000623350 461 ntBASIC13.89□□□□□ -0.19
PRKCDQ05655 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.89□□□□□ -0.19
PRKCDQ05655 AC079781.4-201ENST00000641908 219 ntBASIC13.89□□□□□ -0.19
PRKCDQ05655 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCDQ05655 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 AC100757.3-201ENST00000622361 1406 ntBASIC13.89□□□□□ -0.19
PRKCDQ05655 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCDQ05655 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCDQ05655 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PRKCDQ05655 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCDQ05655 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PRKCDQ05655 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCDQ05655 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 KRT18P13-201ENST00000400056 1290 ntBASIC13.88□□□□□ -0.19
PRKCDQ05655 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.88□□□□□ -0.19
PRKCDQ05655 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCDQ05655 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCDQ05655 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.88□□□□□ -0.19
PRKCDQ05655 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.88□□□□□ -0.19
PRKCDQ05655 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.88□□□□□ -0.19
PRKCDQ05655 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.88□□□□□ -0.19
PRKCDQ05655 MEIS3P1-201ENST00000495167 958 ntBASIC13.88□□□□□ -0.19
PRKCDQ05655 GAPDHP40-201ENST00000505218 1006 ntBASIC13.88□□□□□ -0.19
PRKCDQ05655 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCDQ05655 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.88□□□□□ -0.19
PRKCDQ05655 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
PRKCDQ05655 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.88□□□□□ -0.19
PRKCDQ05655 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms