Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.7□□□□□ -0.06
CDK3Q00526 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.7□□□□□ -0.06
CDK3Q00526 AC005730.2-201ENST00000564549 1184 ntBASIC14.7□□□□□ -0.06
CDK3Q00526 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 BX088702.1-201ENST00000610784 235 ntBASIC14.7□□□□□ -0.06
CDK3Q00526 MIR6787-201ENST00000616675 61 ntBASIC14.7□□□□□ -0.06
CDK3Q00526 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 AC007292.2-201ENST00000593524 1812 ntBASIC14.7□□□□□ -0.06
CDK3Q00526 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 AC006058.4-201ENST00000624016 1670 ntBASIC14.7□□□□□ -0.06
CDK3Q00526 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.7□□□□□ -0.06
CDK3Q00526 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.7□□□□□ -0.06
CDK3Q00526 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDK3Q00526 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 AC144831.1-201ENST00000573312 2656 ntBASIC14.69□□□□□ -0.06
CDK3Q00526 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CDK3Q00526 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDK3Q00526 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.69□□□□□ -0.06
CDK3Q00526 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 AC004898.1-201ENST00000451057 766 ntBASIC14.69□□□□□ -0.06
CDK3Q00526 ZNF767P-206ENST00000513792 565 ntBASIC14.69□□□□□ -0.06
CDK3Q00526 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.69□□□□□ -0.06
CDK3Q00526 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.69□□□□□ -0.06
CDK3Q00526 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 AC009955.4-201ENST00000597192 544 ntBASIC14.69□□□□□ -0.06
CDK3Q00526 AC008825.2-201ENST00000603374 718 ntBASIC14.69□□□□□ -0.06
CDK3Q00526 AC007663.3-201ENST00000609632 465 ntBASIC14.69□□□□□ -0.06
CDK3Q00526 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.69□□□□□ -0.06
CDK3Q00526 AC244093.1-201ENST00000610837 814 ntBASIC14.69□□□□□ -0.06
CDK3Q00526 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.69□□□□□ -0.06
CDK3Q00526 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.69□□□□□ -0.06
CDK3Q00526 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.69□□□□□ -0.06
CDK3Q00526 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CDK3Q00526 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDK3Q00526 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 E2F3P2-201ENST00000447755 1422 ntBASIC14.68□□□□□ -0.06
CDK3Q00526 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDK3Q00526 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDK3Q00526 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms