Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC15.69■□□□□ 0.1
CBX1P83916 AC090643.2-201ENST00000623442 2029 ntBASIC15.69■□□□□ 0.1
CBX1P83916 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CBX1P83916 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CBX1P83916 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CBX1P83916 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.69■□□□□ 0.1
CBX1P83916 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.69■□□□□ 0.1
CBX1P83916 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 RN7SL606P-201ENST00000472779 293 ntBASIC15.69■□□□□ 0.1
CBX1P83916 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 AC107918.2-201ENST00000530817 355 ntBASIC15.69■□□□□ 0.1
CBX1P83916 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 AC124864.1-201ENST00000623408 392 ntBASIC15.69■□□□□ 0.1
CBX1P83916 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CBX1P83916 MKRN5P-201ENST00000445263 1467 ntBASIC15.69■□□□□ 0.1
CBX1P83916 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CBX1P83916 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 AL157996.1-201ENST00000624684 2299 ntBASIC15.69■□□□□ 0.1
CBX1P83916 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX1P83916 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CBX1P83916 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CBX1P83916 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC15.69■□□□□ 0.1
CBX1P83916 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX1P83916 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 NSUN5P2-203ENST00000457352 1529 ntBASIC15.68■□□□□ 0.1
CBX1P83916 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.68■□□□□ 0.1
CBX1P83916 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 AC007787.1-201ENST00000588095 1583 ntBASIC15.68■□□□□ 0.1
CBX1P83916 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CBX1P83916 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.68■□□□□ 0.1
CBX1P83916 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.68■□□□□ 0.1
CBX1P83916 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX1P83916 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CBX1P83916 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX1P83916 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms