Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.52■□□□□ 0.4
IRX3P78415 MESTP3-201ENST00000503460 968 ntBASIC17.52■□□□□ 0.4
IRX3P78415 AC022217.1-201ENST00000521069 738 ntBASIC17.52■□□□□ 0.4
IRX3P78415 AC004466.1-201ENST00000599515 1080 ntBASIC17.52■□□□□ 0.4
IRX3P78415 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.52■□□□□ 0.4
IRX3P78415 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
IRX3P78415 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IRX3P78415 REXO1L5P-201ENST00000622260 2098 ntBASIC17.52■□□□□ 0.39
IRX3P78415 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.52■□□□□ 0.39
IRX3P78415 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
IRX3P78415 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
IRX3P78415 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IRX3P78415 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IRX3P78415 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.52■□□□□ 0.39
IRX3P78415 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.52■□□□□ 0.39
IRX3P78415 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IRX3P78415 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IRX3P78415 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.52■□□□□ 0.39
IRX3P78415 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IRX3P78415 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 FKBP4P6-201ENST00000457486 1332 ntBASIC17.51■□□□□ 0.39
IRX3P78415 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.51■□□□□ 0.39
IRX3P78415 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
IRX3P78415 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IRX3P78415 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.51■□□□□ 0.39
IRX3P78415 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
IRX3P78415 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.51■□□□□ 0.39
IRX3P78415 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.51■□□□□ 0.39
IRX3P78415 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.51■□□□□ 0.39
IRX3P78415 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.51■□□□□ 0.39
IRX3P78415 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.51■□□□□ 0.39
IRX3P78415 RN7SL774P-201ENST00000577467 290 ntBASIC17.51■□□□□ 0.39
IRX3P78415 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IRX3P78415 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
IRX3P78415 AL359258.3-201ENST00000622910 2331 ntBASIC17.51■□□□□ 0.39
IRX3P78415 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.51■□□□□ 0.39
IRX3P78415 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
IRX3P78415 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX3P78415 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX3P78415 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
IRX3P78415 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
IRX3P78415 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.5■□□□□ 0.39
IRX3P78415 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.5■□□□□ 0.39
IRX3P78415 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 AL603832.2-201ENST00000566195 2125 ntBASIC17.5■□□□□ 0.39
IRX3P78415 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IRX3P78415 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.5■□□□□ 0.39
IRX3P78415 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.5■□□□□ 0.39
IRX3P78415 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IRX3P78415 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.5■□□□□ 0.39
IRX3P78415 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.5■□□□□ 0.39
IRX3P78415 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.5■□□□□ 0.39
IRX3P78415 RNMTL1P1-201ENST00000454103 560 ntBASIC17.5■□□□□ 0.39
IRX3P78415 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.5■□□□□ 0.39
IRX3P78415 AC013355.1-201ENST00000562625 723 ntBASIC17.5■□□□□ 0.39
IRX3P78415 DUX4L47-201ENST00000566374 394 ntBASIC17.5■□□□□ 0.39
IRX3P78415 AL645939.5-201ENST00000606834 243 ntBASIC17.5■□□□□ 0.39
IRX3P78415 AC022748.3-201ENST00000621828 275 ntBASIC17.5■□□□□ 0.39
IRX3P78415 AC100757.4-201ENST00000626934 759 ntBASIC17.5■□□□□ 0.39
IRX3P78415 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms