Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.71□□□□□ -0.22
CXCR4P61073 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCR4P61073 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.71□□□□□ -0.22
CXCR4P61073 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCR4P61073 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.71□□□□□ -0.22
CXCR4P61073 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCR4P61073 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.71□□□□□ -0.22
CXCR4P61073 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.71□□□□□ -0.22
CXCR4P61073 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCR4P61073 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.71□□□□□ -0.22
CXCR4P61073 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCR4P61073 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCR4P61073 AL035456.1-201ENST00000456064 1369 ntBASIC13.71□□□□□ -0.22
CXCR4P61073 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.71□□□□□ -0.22
CXCR4P61073 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 AC012617.1-204ENST00000586340 2305 ntBASIC13.7□□□□□ -0.22
CXCR4P61073 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.7□□□□□ -0.22
CXCR4P61073 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CXCR4P61073 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 AC011840.2-201ENST00000563063 1520 ntBASIC13.7□□□□□ -0.22
CXCR4P61073 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CXCR4P61073 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CXCR4P61073 FAM90A12P-201ENST00000519497 2375 ntBASIC13.7□□□□□ -0.22
CXCR4P61073 FAM90A24P-201ENST00000520792 2369 ntBASIC13.7□□□□□ -0.22
CXCR4P61073 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
CXCR4P61073 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.7□□□□□ -0.22
CXCR4P61073 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.7□□□□□ -0.22
CXCR4P61073 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.7□□□□□ -0.22
CXCR4P61073 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.7□□□□□ -0.22
CXCR4P61073 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.7□□□□□ -0.22
CXCR4P61073 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.7□□□□□ -0.22
CXCR4P61073 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCR4P61073 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.7□□□□□ -0.22
CXCR4P61073 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCR4P61073 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CXCR4P61073 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCR4P61073 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CXCR4P61073 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCR4P61073 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCR4P61073 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.69□□□□□ -0.22
CXCR4P61073 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCR4P61073 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CXCR4P61073 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCR4P61073 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
CXCR4P61073 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 AC074338.1-201ENST00000416825 156 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms