Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.98□□□□□ -0.33
ACTBP60709 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ACTBP60709 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ACTBP60709 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.98□□□□□ -0.33
ACTBP60709 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ACTBP60709 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.98□□□□□ -0.33
ACTBP60709 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ACTBP60709 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.98□□□□□ -0.33
ACTBP60709 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.98□□□□□ -0.33
ACTBP60709 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTBP60709 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
ACTBP60709 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ACTBP60709 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 AL133267.1-201ENST00000398220 340 ntBASIC12.97□□□□□ -0.33
ACTBP60709 MIR1233-2-201ENST00000408138 82 ntBASIC12.97□□□□□ -0.33
ACTBP60709 MIR1233-1-201ENST00000408722 82 ntBASIC12.97□□□□□ -0.33
ACTBP60709 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.97□□□□□ -0.33
ACTBP60709 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.97□□□□□ -0.33
ACTBP60709 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.97□□□□□ -0.33
ACTBP60709 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 AP3S2-216ENST00000617003 1561 ntBASIC12.97□□□□□ -0.33
ACTBP60709 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ACTBP60709 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ACTBP60709 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ACTBP60709 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTBP60709 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTBP60709 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ACTBP60709 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTBP60709 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.96□□□□□ -0.33
ACTBP60709 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTBP60709 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ACTBP60709 AC016397.2-201ENST00000624848 1985 ntBASIC12.96□□□□□ -0.33
ACTBP60709 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTBP60709 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms