Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S2P59780 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.93□□□□□ -0.34
AP3S2P59780 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
AP3S2P59780 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
AP3S2P59780 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
AP3S2P59780 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
AP3S2P59780 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
AP3S2P59780 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.93□□□□□ -0.34
AP3S2P59780 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 AC002056.1-201ENST00000395613 760 ntBASIC12.93□□□□□ -0.34
AP3S2P59780 AL133267.1-201ENST00000398220 340 ntBASIC12.93□□□□□ -0.34
AP3S2P59780 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.93□□□□□ -0.34
AP3S2P59780 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
AP3S2P59780 AC074044.1-201ENST00000609673 707 ntBASIC12.93□□□□□ -0.34
AP3S2P59780 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
AP3S2P59780 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
AP3S2P59780 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S2P59780 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
AP3S2P59780 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.93□□□□□ -0.34
AP3S2P59780 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S2P59780 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
AP3S2P59780 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S2P59780 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
AP3S2P59780 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.92□□□□□ -0.34
AP3S2P59780 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 UNC93B6-202ENST00000528242 690 ntBASIC12.92□□□□□ -0.34
AP3S2P59780 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms