Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN6P56747 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 AL137783.1-201ENST00000623494 1896 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 AC136759.1-202ENST00000530858 2194 ntBASIC14.37□□□□□ -0.11
CLDN6P56747 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 CAP2P1-201ENST00000557743 1390 ntBASIC14.37□□□□□ -0.11
CLDN6P56747 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN6P56747 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLDN6P56747 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLDN6P56747 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 KRT18P66-201ENST00000452970 1269 ntBASIC14.37□□□□□ -0.11
CLDN6P56747 RN7SL8P-201ENST00000461771 266 ntBASIC14.37□□□□□ -0.11
CLDN6P56747 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.37□□□□□ -0.11
CLDN6P56747 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.37□□□□□ -0.11
CLDN6P56747 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.37□□□□□ -0.11
CLDN6P56747 MIR4754-201ENST00000582477 89 ntBASIC14.37□□□□□ -0.11
CLDN6P56747 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN6P56747 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLDN6P56747 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN6P56747 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLDN6P56747 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN6P56747 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN6P56747 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN6P56747 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN6P56747 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 AC244394.1-201ENST00000435000 1665 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN6P56747 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN6P56747 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN6P56747 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN6P56747 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN6P56747 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CLDN6P56747 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN6P56747 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN6P56747 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN6P56747 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN6P56747 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN6P56747 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN6P56747 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN6P56747 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN6P56747 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 RPL8P2-201ENST00000430538 502 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 AL353637.1-201ENST00000451571 732 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 RN7SL818P-201ENST00000485099 259 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 SCARNA21-201ENST00000517026 139 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 DUX4L46-201ENST00000566845 751 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 AC005962.1-201ENST00000584100 773 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CLDN6P56747 RN7SL725P-201ENST00000606439 259 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 AL136295.7-201ENST00000619226 1200 ntBASIC14.36□□□□□ -0.11
CLDN6P56747 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN6P56747 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN6P56747 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN6P56747 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN6P56747 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms