Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 AC136621.1-201ENST00000624017 2304 ntBASIC14.01□□□□□ -0.17
PER3P56645 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
PER3P56645 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.01□□□□□ -0.17
PER3P56645 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.01□□□□□ -0.17
PER3P56645 VDAC1P7-201ENST00000462417 847 ntBASIC14.01□□□□□ -0.17
PER3P56645 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.01□□□□□ -0.17
PER3P56645 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PER3P56645 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PER3P56645 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PER3P56645 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.01□□□□□ -0.17
PER3P56645 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14□□□□□ -0.17
PER3P56645 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14□□□□□ -0.17
PER3P56645 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14□□□□□ -0.17
PER3P56645 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
PER3P56645 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14□□□□□ -0.17
PER3P56645 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 OR2I1P-209ENST00000641730 5365 ntBASIC14□□□□□ -0.17
PER3P56645 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14□□□□□ -0.17
PER3P56645 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14□□□□□ -0.17
PER3P56645 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PER3P56645 BTBD6P1-201ENST00000412176 1267 ntBASIC14□□□□□ -0.17
PER3P56645 AC074338.1-201ENST00000416825 156 ntBASIC14□□□□□ -0.17
PER3P56645 AC136604.1-201ENST00000418535 575 ntBASIC14□□□□□ -0.17
PER3P56645 AC026954.1-201ENST00000429771 1293 ntBASIC14□□□□□ -0.17
PER3P56645 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14□□□□□ -0.17
PER3P56645 IGHJ2P-201ENST00000454480 60 ntBASIC14□□□□□ -0.17
PER3P56645 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14□□□□□ -0.17
PER3P56645 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14□□□□□ -0.17
PER3P56645 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 HNRNPUP1-201ENST00000554987 333 ntBASIC14□□□□□ -0.17
PER3P56645 C2orf69P2-201ENST00000562032 1123 ntBASIC14□□□□□ -0.17
PER3P56645 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14□□□□□ -0.17
PER3P56645 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 AC107918.4-201ENST00000641966 3141 ntBASIC14□□□□□ -0.17
PER3P56645 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14□□□□□ -0.17
PER3P56645 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14□□□□□ -0.17
PER3P56645 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14□□□□□ -0.17
PER3P56645 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PER3P56645 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PER3P56645 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14□□□□□ -0.17
PER3P56645 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PER3P56645 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms