Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PSMD4P55036 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 CICP23-201ENST00000605013 2741 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PSMD4P55036 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.03□□□□□ -0.16
PSMD4P55036 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PSMD4P55036 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.03□□□□□ -0.16
PSMD4P55036 RNU1-114P-201ENST00000365297 166 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 ACTG1P3-201ENST00000431775 1114 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.03□□□□□ -0.16
PSMD4P55036 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.03□□□□□ -0.16
PSMD4P55036 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 RN7SL692P-201ENST00000464677 288 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 GIMAP3P-201ENST00000495150 836 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.03□□□□□ -0.16
PSMD4P55036 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.03□□□□□ -0.16
PSMD4P55036 CLUHP6-201ENST00000580789 941 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 KRT8P35-201ENST00000483942 1338 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.03□□□□□ -0.16
PSMD4P55036 AC007292.2-201ENST00000593524 1812 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.03□□□□□ -0.16
PSMD4P55036 REXO1L5P-201ENST00000622260 2098 ntBASIC14.03□□□□□ -0.16
PSMD4P55036 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PSMD4P55036 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PSMD4P55036 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PSMD4P55036 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PSMD4P55036 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PSMD4P55036 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMD4P55036 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
PSMD4P55036 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PSMD4P55036 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
PSMD4P55036 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PSMD4P55036 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PSMD4P55036 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PSMD4P55036 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PSMD4P55036 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.02□□□□□ -0.16
PSMD4P55036 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PSMD4P55036 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.02□□□□□ -0.16
PSMD4P55036 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.02□□□□□ -0.16
PSMD4P55036 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PSMD4P55036 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMD4P55036 CU639417.3-201ENST00000624240 1404 ntBASIC14.02□□□□□ -0.16
PSMD4P55036 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMD4P55036 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMD4P55036 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PSMD4P55036 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMD4P55036 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.02□□□□□ -0.17
PSMD4P55036 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.02□□□□□ -0.17
PSMD4P55036 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMD4P55036 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PSMD4P55036 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMD4P55036 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.02□□□□□ -0.17
PSMD4P55036 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMD4P55036 HLA-K-203ENST00000430151 1046 ntBASIC14.02□□□□□ -0.17
PSMD4P55036 AC007389.4-201ENST00000454674 793 ntBASIC14.02□□□□□ -0.17
PSMD4P55036 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.02□□□□□ -0.17
PSMD4P55036 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.02□□□□□ -0.17
PSMD4P55036 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.02□□□□□ -0.17
PSMD4P55036 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PSMD4P55036 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms