Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 FAM197Y7-201ENST00000432892 766 ntBASIC18.25■□□□□ 0.51
PDE1AP54750 COX20P2-201ENST00000452636 358 ntBASIC18.25■□□□□ 0.51
PDE1AP54750 RNA5SP486-201ENST00000515961 83 ntBASIC18.25■□□□□ 0.51
PDE1AP54750 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.25■□□□□ 0.51
PDE1AP54750 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.25■□□□□ 0.51
PDE1AP54750 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.25■□□□□ 0.51
PDE1AP54750 LINC02084-201ENST00000606069 1096 ntBASIC18.25■□□□□ 0.51
PDE1AP54750 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.25■□□□□ 0.51
PDE1AP54750 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PDE1AP54750 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PDE1AP54750 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE1AP54750 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE1AP54750 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE1AP54750 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 AC027601.5-201ENST00000624065 2482 ntBASIC18.24■□□□□ 0.51
PDE1AP54750 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
PDE1AP54750 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.24■□□□□ 0.51
PDE1AP54750 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 TPM3P8-201ENST00000330554 643 ntBASIC18.24■□□□□ 0.51
PDE1AP54750 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PDE1AP54750 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
PDE1AP54750 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 RN7SKP175-201ENST00000408472 289 ntBASIC18.24■□□□□ 0.51
PDE1AP54750 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.24■□□□□ 0.51
PDE1AP54750 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE1AP54750 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.24■□□□□ 0.51
PDE1AP54750 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE1AP54750 AP001002.3-201ENST00000623482 206 ntBASIC18.24■□□□□ 0.51
PDE1AP54750 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE1AP54750 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PDE1AP54750 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE1AP54750 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE1AP54750 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.24■□□□□ 0.51
PDE1AP54750 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PDE1AP54750 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PDE1AP54750 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE1AP54750 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDE1AP54750 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE1AP54750 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDE1AP54750 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PDE1AP54750 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
PDE1AP54750 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE1AP54750 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDE1AP54750 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 CNN2P8-201ENST00000421872 913 ntBASIC18.23■□□□□ 0.51
PDE1AP54750 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE1AP54750 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PDE1AP54750 AC005225.4-201ENST00000557330 545 ntBASIC18.23■□□□□ 0.51
PDE1AP54750 BX088702.1-201ENST00000610784 235 ntBASIC18.23■□□□□ 0.51
PDE1AP54750 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.23■□□□□ 0.51
PDE1AP54750 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE1AP54750 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.23■□□□□ 0.51
PDE1AP54750 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms