Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.08■□□□□ 0.16
RAD23BP54727 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAD23BP54727 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAD23BP54727 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAD23BP54727 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.08■□□□□ 0.16
RAD23BP54727 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.08■□□□□ 0.16
RAD23BP54727 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
RAD23BP54727 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.07■□□□□ 0.16
RAD23BP54727 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.07■□□□□ 0.16
RAD23BP54727 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 POM121L8P-201ENST00000417732 1281 ntBASIC16.07■□□□□ 0.16
RAD23BP54727 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 POM121L9P-203ENST00000441984 1285 ntBASIC16.07■□□□□ 0.16
RAD23BP54727 FO681548.1-201ENST00000455617 1132 ntBASIC16.07■□□□□ 0.16
RAD23BP54727 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAD23BP54727 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAD23BP54727 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.07■□□□□ 0.16
RAD23BP54727 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 RN7SL48P-201ENST00000579283 293 ntBASIC16.07■□□□□ 0.16
RAD23BP54727 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 ENPP7P14-201ENST00000621765 1040 ntBASIC16.07■□□□□ 0.16
RAD23BP54727 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.07■□□□□ 0.16
RAD23BP54727 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.07■□□□□ 0.16
RAD23BP54727 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RAD23BP54727 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.07■□□□□ 0.16
RAD23BP54727 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD23BP54727 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAD23BP54727 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 CICP23-201ENST00000605013 2741 ntBASIC16.06■□□□□ 0.16
RAD23BP54727 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.06■□□□□ 0.16
RAD23BP54727 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 AC112492.5-201ENST00000421897 457 ntBASIC16.06■□□□□ 0.16
RAD23BP54727 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.06■□□□□ 0.16
RAD23BP54727 AC016694.1-201ENST00000434179 700 ntBASIC16.06■□□□□ 0.16
RAD23BP54727 AC245100.3-201ENST00000441281 285 ntBASIC16.06■□□□□ 0.16
RAD23BP54727 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 AC007551.1-201ENST00000457394 519 ntBASIC16.06■□□□□ 0.16
RAD23BP54727 KRT17P8-201ENST00000540749 863 ntBASIC16.06■□□□□ 0.16
RAD23BP54727 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.06■□□□□ 0.16
RAD23BP54727 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.06■□□□□ 0.16
RAD23BP54727 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.06■□□□□ 0.16
RAD23BP54727 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAD23BP54727 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
RAD23BP54727 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.06■□□□□ 0.16
RAD23BP54727 SBF1P1-201ENST00000444527 5631 ntBASIC16.05■□□□□ 0.16
RAD23BP54727 LINC01101-201ENST00000622953 1884 ntBASIC16.05■□□□□ 0.16
RAD23BP54727 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.05■□□□□ 0.16
RAD23BP54727 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
RAD23BP54727 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAD23BP54727 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.05■□□□□ 0.16
RAD23BP54727 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms