Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.77□□□□□ -0.05
LIMK1P53667 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK1P53667 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.77□□□□□ -0.05
LIMK1P53667 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK1P53667 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.77□□□□□ -0.05
LIMK1P53667 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.77□□□□□ -0.05
LIMK1P53667 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK1P53667 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.77□□□□□ -0.05
LIMK1P53667 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.77□□□□□ -0.05
LIMK1P53667 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LIMK1P53667 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
LIMK1P53667 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
LIMK1P53667 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK1P53667 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK1P53667 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK1P53667 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.77□□□□□ -0.05
LIMK1P53667 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.77□□□□□ -0.05
LIMK1P53667 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 AC007787.1-201ENST00000588095 1583 ntBASIC14.77□□□□□ -0.05
LIMK1P53667 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK1P53667 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK1P53667 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK1P53667 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LIMK1P53667 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LIMK1P53667 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.76□□□□□ -0.05
LIMK1P53667 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.76□□□□□ -0.05
LIMK1P53667 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.76□□□□□ -0.05
LIMK1P53667 AL139008.1-201ENST00000437894 228 ntBASIC14.76□□□□□ -0.05
LIMK1P53667 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.76□□□□□ -0.05
LIMK1P53667 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 AC010234.1-201ENST00000494599 870 ntBASIC14.76□□□□□ -0.05
LIMK1P53667 MESTP3-201ENST00000503460 968 ntBASIC14.76□□□□□ -0.05
LIMK1P53667 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.76□□□□□ -0.05
LIMK1P53667 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK1P53667 AC009779.1-201ENST00000551138 283 ntBASIC14.76□□□□□ -0.05
LIMK1P53667 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK1P53667 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.76□□□□□ -0.05
LIMK1P53667 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 AC009955.4-201ENST00000597192 544 ntBASIC14.76□□□□□ -0.05
LIMK1P53667 AC138894.2-201ENST00000602838 371 ntBASIC14.76□□□□□ -0.05
LIMK1P53667 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LIMK1P53667 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK1P53667 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK1P53667 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK1P53667 AC007292.2-201ENST00000593524 1812 ntBASIC14.76□□□□□ -0.05
LIMK1P53667 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.75□□□□□ -0.05
LIMK1P53667 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LIMK1P53667 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.75□□□□□ -0.05
LIMK1P53667 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK1P53667 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms