Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.62□□□□□ -0.07
KRT6CP48668 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
KRT6CP48668 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KRT6CP48668 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KRT6CP48668 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.62□□□□□ -0.07
KRT6CP48668 MRPS18AP1-201ENST00000414458 589 ntBASIC14.62□□□□□ -0.07
KRT6CP48668 AC134915.1-201ENST00000426461 574 ntBASIC14.62□□□□□ -0.07
KRT6CP48668 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.62□□□□□ -0.07
KRT6CP48668 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.62□□□□□ -0.07
KRT6CP48668 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.62□□□□□ -0.07
KRT6CP48668 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.62□□□□□ -0.07
KRT6CP48668 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.62□□□□□ -0.07
KRT6CP48668 BRI3BPP1-201ENST00000594224 787 ntBASIC14.62□□□□□ -0.07
KRT6CP48668 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.62□□□□□ -0.07
KRT6CP48668 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6CP48668 AC079781.5-202ENST00000641784 3743 ntBASIC14.62□□□□□ -0.07
KRT6CP48668 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6CP48668 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 INTS4P2-202ENST00000614726 2019 ntBASIC14.61□□□□□ -0.07
KRT6CP48668 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
KRT6CP48668 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT6CP48668 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 BX640514.1-201ENST00000583223 1918 ntBASIC14.61□□□□□ -0.07
KRT6CP48668 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT6CP48668 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT6CP48668 RNA5SP421-201ENST00000516864 134 ntBASIC14.61□□□□□ -0.07
KRT6CP48668 AC055876.2-201ENST00000531834 546 ntBASIC14.61□□□□□ -0.07
KRT6CP48668 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 AC007431.3-201ENST00000623221 587 ntBASIC14.61□□□□□ -0.07
KRT6CP48668 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT6CP48668 PRSS30P-206ENST00000641773 873 ntBASIC14.61□□□□□ -0.07
KRT6CP48668 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
KRT6CP48668 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT6CP48668 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
KRT6CP48668 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT6CP48668 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6CP48668 CR383656.2-201ENST00000548656 2254 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms