Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 PCDHA3-202ENST00000532566 4594 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC6A12P48065 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC6A12P48065 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC6A12P48065 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC6A12P48065 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC6A12P48065 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC6A12P48065 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SLC6A12P48065 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC6A12P48065 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.42□□□□□ -0.1
SLC6A12P48065 TPM3P8-201ENST00000330554 643 ntBASIC14.42□□□□□ -0.1
SLC6A12P48065 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC6A12P48065 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.42□□□□□ -0.1
SLC6A12P48065 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.42□□□□□ -0.1
SLC6A12P48065 ALG3P1-201ENST00000508806 1114 ntBASIC14.42□□□□□ -0.1
SLC6A12P48065 RNA5SP486-201ENST00000515961 83 ntBASIC14.42□□□□□ -0.1
SLC6A12P48065 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC6A12P48065 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC6A12P48065 BTNL10-201ENST00000595971 695 ntBASIC14.42□□□□□ -0.1
SLC6A12P48065 AL022328.1-201ENST00000610050 478 ntBASIC14.42□□□□□ -0.1
SLC6A12P48065 BX088702.1-201ENST00000610784 235 ntBASIC14.42□□□□□ -0.1
SLC6A12P48065 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC6A12P48065 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
SLC6A12P48065 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC6A12P48065 MYADML-201ENST00000474610 2147 ntBASIC14.42□□□□□ -0.1
SLC6A12P48065 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC6A12P48065 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC6A12P48065 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SLC6A12P48065 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC6A12P48065 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 AL590640.2-201ENST00000457038 527 ntBASIC14.41□□□□□ -0.1
SLC6A12P48065 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 FTH1P14-201ENST00000482930 551 ntBASIC14.41□□□□□ -0.1
SLC6A12P48065 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC6A12P48065 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 AP003171.2-201ENST00000528208 925 ntBASIC14.41□□□□□ -0.1
SLC6A12P48065 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC6A12P48065 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC6A12P48065 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC6A12P48065 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.41□□□□□ -0.1
SLC6A12P48065 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SLC6A12P48065 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 AC009093.2-202ENST00000620513 2079 ntBASIC14.41□□□□□ -0.1
SLC6A12P48065 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC6A12P48065 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 AC063926.3-201ENST00000624734 5658 ntBASIC14.41□□□□□ -0.1
SLC6A12P48065 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC6A12P48065 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC6A12P48065 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms