Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CXCL12P48061 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.74□□□□□ -0.05
CXCL12P48061 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.74□□□□□ -0.05
CXCL12P48061 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL12P48061 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CXCL12P48061 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.73□□□□□ -0.05
CXCL12P48061 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CXCL12P48061 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL12P48061 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CXCL12P48061 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CXCL12P48061 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL12P48061 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 TMBIM7P-202ENST00000641474 1516 ntBASIC14.73□□□□□ -0.05
CXCL12P48061 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL12P48061 AL139008.1-201ENST00000437894 228 ntBASIC14.73□□□□□ -0.05
CXCL12P48061 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.73□□□□□ -0.05
CXCL12P48061 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 AL022344.2-201ENST00000568976 968 ntBASIC14.73□□□□□ -0.05
CXCL12P48061 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.73□□□□□ -0.05
CXCL12P48061 AC023090.2-201ENST00000625182 2110 ntBASIC14.73□□□□□ -0.05
CXCL12P48061 LINC00431-202ENST00000636375 159 ntBASIC14.73□□□□□ -0.05
CXCL12P48061 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL12P48061 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL12P48061 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL12P48061 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.73□□□□□ -0.05
CXCL12P48061 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CXCL12P48061 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.72□□□□□ -0.05
CXCL12P48061 BCAS2P2-201ENST00000425064 674 ntBASIC14.72□□□□□ -0.05
CXCL12P48061 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.72□□□□□ -0.05
CXCL12P48061 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CXCL12P48061 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.72□□□□□ -0.05
CXCL12P48061 AP000911.2-201ENST00000534330 502 ntBASIC14.72□□□□□ -0.05
CXCL12P48061 CR383656.3-201ENST00000551315 183 ntBASIC14.72□□□□□ -0.05
CXCL12P48061 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.72□□□□□ -0.05
CXCL12P48061 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.72□□□□□ -0.05
CXCL12P48061 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.72□□□□□ -0.05
CXCL12P48061 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.72□□□□□ -0.05
CXCL12P48061 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 AC138466.5-201ENST00000624002 808 ntBASIC14.72□□□□□ -0.05
CXCL12P48061 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.72□□□□□ -0.05
CXCL12P48061 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.72□□□□□ -0.05
CXCL12P48061 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CXCL12P48061 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.72□□□□□ -0.05
CXCL12P48061 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms