Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.31□□□□□ -0.44
CEACAM3P40198 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.31□□□□□ -0.44
CEACAM3P40198 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 REXO1L5P-201ENST00000622260 2098 ntBASIC12.31□□□□□ -0.44
CEACAM3P40198 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.31□□□□□ -0.44
CEACAM3P40198 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.3□□□□□ -0.44
CEACAM3P40198 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.3□□□□□ -0.44
CEACAM3P40198 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 AC005034.1-201ENST00000426657 489 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 HLA-K-203ENST00000430151 1046 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.3□□□□□ -0.44
CEACAM3P40198 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 GAPDHP21-201ENST00000450301 1010 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.3□□□□□ -0.44
CEACAM3P40198 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.3□□□□□ -0.44
CEACAM3P40198 SLC25A47P1-201ENST00000531577 414 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CEACAM3P40198 AC132938.2-201ENST00000579188 680 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CEACAM3P40198 BTNL10-201ENST00000595971 695 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 AL591163.1-201ENST00000641757 987 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.3□□□□□ -0.44
CEACAM3P40198 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.3□□□□□ -0.44
CEACAM3P40198 AC055811.4-201ENST00000624039 1754 ntBASIC12.3□□□□□ -0.44
CEACAM3P40198 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CEACAM3P40198 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CEACAM3P40198 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.29□□□□□ -0.44
CEACAM3P40198 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.29□□□□□ -0.44
CEACAM3P40198 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CEACAM3P40198 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.29□□□□□ -0.44
CEACAM3P40198 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CEACAM3P40198 AL009178.2-201ENST00000597278 2719 ntBASIC12.29□□□□□ -0.44
CEACAM3P40198 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms