Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 AC003102.2-201ENST00000589195 1469 ntBASIC17.08■□□□□ 0.32
COPB2P35606 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
COPB2P35606 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.08■□□□□ 0.32
COPB2P35606 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.08■□□□□ 0.32
COPB2P35606 FGFR3P5-201ENST00000564496 886 ntBASIC17.08■□□□□ 0.32
COPB2P35606 RN7SL574P-201ENST00000581512 297 ntBASIC17.08■□□□□ 0.32
COPB2P35606 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.08■□□□□ 0.32
COPB2P35606 NAP1L6-202ENST00000641404 1222 ntBASIC17.08■□□□□ 0.32
COPB2P35606 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.08■□□□□ 0.32
COPB2P35606 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
COPB2P35606 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.08■□□□□ 0.32
COPB2P35606 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPB2P35606 AC020658.6-201ENST00000623564 1870 ntBASIC17.07■□□□□ 0.32
COPB2P35606 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.07■□□□□ 0.32
COPB2P35606 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.07■□□□□ 0.32
COPB2P35606 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COPB2P35606 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.07■□□□□ 0.32
COPB2P35606 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 AL008718.2-201ENST00000609206 1313 ntBASIC17.07■□□□□ 0.32
COPB2P35606 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COPB2P35606 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.07■□□□□ 0.32
COPB2P35606 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 ACTG1P2-201ENST00000415776 1125 ntBASIC17.07■□□□□ 0.32
COPB2P35606 ACTG1P11-201ENST00000425411 1125 ntBASIC17.07■□□□□ 0.32
COPB2P35606 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.07■□□□□ 0.32
COPB2P35606 TMEM198B-204ENST00000484016 896 ntBASIC17.07■□□□□ 0.32
COPB2P35606 HLA-J-204ENST00000495278 958 ntBASIC17.07■□□□□ 0.32
COPB2P35606 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.07■□□□□ 0.32
COPB2P35606 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.07■□□□□ 0.32
COPB2P35606 BX088702.1-201ENST00000610784 235 ntBASIC17.07■□□□□ 0.32
COPB2P35606 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.07■□□□□ 0.32
COPB2P35606 AL353726.2-201ENST00000623259 884 ntBASIC17.07■□□□□ 0.32
COPB2P35606 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.07■□□□□ 0.32
COPB2P35606 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 AC020910.5-201ENST00000623668 1865 ntBASIC17.07■□□□□ 0.32
COPB2P35606 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 AL513477.1-201ENST00000602865 2407 ntBASIC17.07■□□□□ 0.32
COPB2P35606 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COPB2P35606 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPB2P35606 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.07■□□□□ 0.32
COPB2P35606 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.06■□□□□ 0.32
COPB2P35606 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
COPB2P35606 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COPB2P35606 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 AC087481.3-201ENST00000602886 1894 ntBASIC17.06■□□□□ 0.32
COPB2P35606 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
COPB2P35606 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 HINT2P1-201ENST00000419438 481 ntBASIC17.06■□□□□ 0.32
COPB2P35606 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.06■□□□□ 0.32
COPB2P35606 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.06■□□□□ 0.32
COPB2P35606 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 AL035414.1-201ENST00000451327 857 ntBASIC17.06■□□□□ 0.32
COPB2P35606 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 AC012618.1-201ENST00000461223 412 ntBASIC17.06■□□□□ 0.32
COPB2P35606 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.06■□□□□ 0.32
COPB2P35606 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.06■□□□□ 0.32
COPB2P35606 AC090857.1-201ENST00000527400 390 ntBASIC17.06■□□□□ 0.32
COPB2P35606 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
COPB2P35606 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
COPB2P35606 AC009779.1-201ENST00000551138 283 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms