Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHRNA5P30532 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHRNA5P30532 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA5P30532 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CHRNA5P30532 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA5P30532 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.06■□□□□ 0.48
CHRNA5P30532 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 RPL35P9-201ENST00000446059 350 ntBASIC18.06■□□□□ 0.48
CHRNA5P30532 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.06■□□□□ 0.48
CHRNA5P30532 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA5P30532 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA5P30532 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 AC140113.1-201ENST00000603467 169 ntBASIC18.06■□□□□ 0.48
CHRNA5P30532 PEBP1P2-201ENST00000603980 558 ntBASIC18.06■□□□□ 0.48
CHRNA5P30532 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA5P30532 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA5P30532 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA5P30532 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA5P30532 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.05■□□□□ 0.48
CHRNA5P30532 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 AC108734.2-201ENST00000420887 1069 ntBASIC18.05■□□□□ 0.48
CHRNA5P30532 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 AL139339.2-201ENST00000608063 657 ntBASIC18.05■□□□□ 0.48
CHRNA5P30532 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA5P30532 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA5P30532 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA5P30532 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA5P30532 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA5P30532 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA5P30532 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CHRNA5P30532 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA5P30532 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA5P30532 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA5P30532 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 KRT8P28-201ENST00000433288 1390 ntBASIC18.04■□□□□ 0.48
CHRNA5P30532 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms