Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 DNAJB3-201ENST00000446806 729 ntBASIC14.66□□□□□ -0.06
EPHA3P29320 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.66□□□□□ -0.06
EPHA3P29320 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.66□□□□□ -0.06
EPHA3P29320 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.66□□□□□ -0.06
EPHA3P29320 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.66□□□□□ -0.06
EPHA3P29320 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
EPHA3P29320 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.66□□□□□ -0.06
EPHA3P29320 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.66□□□□□ -0.06
EPHA3P29320 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 SPDYE12P-201ENST00000618416 771 ntBASIC14.66□□□□□ -0.06
EPHA3P29320 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.66□□□□□ -0.06
EPHA3P29320 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
EPHA3P29320 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.65□□□□□ -0.06
EPHA3P29320 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
EPHA3P29320 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 DGCR9-201ENST00000609630 2415 ntBASIC14.65□□□□□ -0.06
EPHA3P29320 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
EPHA3P29320 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 HLA-K-203ENST00000430151 1046 ntBASIC14.65□□□□□ -0.06
EPHA3P29320 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.65□□□□□ -0.06
EPHA3P29320 HLA-V-204ENST00000476601 1289 ntBASIC14.65□□□□□ -0.06
EPHA3P29320 SDHAP3-202ENST00000515467 728 ntBASIC14.65□□□□□ -0.06
EPHA3P29320 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
EPHA3P29320 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
EPHA3P29320 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.65□□□□□ -0.06
EPHA3P29320 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.65□□□□□ -0.06
EPHA3P29320 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
EPHA3P29320 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA3P29320 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.65□□□□□ -0.06
EPHA3P29320 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.65□□□□□ -0.06
EPHA3P29320 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.65□□□□□ -0.06
EPHA3P29320 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 AC126335.2-201ENST00000623362 4637 ntBASIC14.64□□□□□ -0.07
EPHA3P29320 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.64□□□□□ -0.07
EPHA3P29320 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
EPHA3P29320 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.64□□□□□ -0.07
EPHA3P29320 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.64□□□□□ -0.07
EPHA3P29320 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
EPHA3P29320 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.64□□□□□ -0.07
EPHA3P29320 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
EPHA3P29320 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
EPHA3P29320 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
EPHA3P29320 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
EPHA3P29320 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.64□□□□□ -0.07
EPHA3P29320 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.64□□□□□ -0.07
EPHA3P29320 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.64□□□□□ -0.07
EPHA3P29320 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.64□□□□□ -0.07
EPHA3P29320 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.64□□□□□ -0.07
EPHA3P29320 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 AL138828.2-201ENST00000615812 383 ntBASIC14.64□□□□□ -0.07
EPHA3P29320 AC004461.2-201ENST00000629517 803 ntBASIC14.64□□□□□ -0.07
EPHA3P29320 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA3P29320 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms