Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KRT8P1-201ENST00000557533 1207 ntBASIC16.64■□□□□ 0.25
COL11A1P12107 RN7SL665P-201ENST00000578793 300 ntBASIC16.64■□□□□ 0.25
COL11A1P12107 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.64■□□□□ 0.25
COL11A1P12107 AC090386.2-201ENST00000623010 1039 ntBASIC16.64■□□□□ 0.25
COL11A1P12107 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.64■□□□□ 0.25
COL11A1P12107 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
COL11A1P12107 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
COL11A1P12107 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.64■□□□□ 0.25
COL11A1P12107 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COL11A1P12107 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 AL355334.1-201ENST00000417713 215 ntBASIC16.63■□□□□ 0.25
COL11A1P12107 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.63■□□□□ 0.25
COL11A1P12107 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.63■□□□□ 0.25
COL11A1P12107 MIR6842-201ENST00000612539 65 ntBASIC16.63■□□□□ 0.25
COL11A1P12107 LINC01783-202ENST00000614408 828 ntBASIC16.63■□□□□ 0.25
COL11A1P12107 BX284668.2-205ENST00000619677 828 ntBASIC16.63■□□□□ 0.25
COL11A1P12107 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL11A1P12107 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.63■□□□□ 0.25
COL11A1P12107 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL11A1P12107 AL354702.1-201ENST00000442006 1960 ntBASIC16.63■□□□□ 0.25
COL11A1P12107 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 TCAF2P1-201ENST00000291129 2421 ntBASIC16.63■□□□□ 0.25
COL11A1P12107 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.63■□□□□ 0.25
COL11A1P12107 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.63■□□□□ 0.25
COL11A1P12107 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.63■□□□□ 0.25
COL11A1P12107 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.63■□□□□ 0.25
COL11A1P12107 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL11A1P12107 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.63■□□□□ 0.25
COL11A1P12107 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.63■□□□□ 0.25
COL11A1P12107 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL11A1P12107 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL11A1P12107 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL11A1P12107 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COL11A1P12107 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.62■□□□□ 0.25
COL11A1P12107 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.62■□□□□ 0.25
COL11A1P12107 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 SCARNA12-201ENST00000459155 270 ntBASIC16.62■□□□□ 0.25
COL11A1P12107 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.62■□□□□ 0.25
COL11A1P12107 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
COL11A1P12107 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 SIGLEC18P-201ENST00000602271 909 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms