Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.31■□□□□ 0.68
MS4A1P11836 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.31■□□□□ 0.68
MS4A1P11836 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.31■□□□□ 0.68
MS4A1P11836 AP005019.2-201ENST00000615104 511 ntBASIC19.31■□□□□ 0.68
MS4A1P11836 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
MS4A1P11836 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC19.31■□□□□ 0.68
MS4A1P11836 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MS4A1P11836 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.31■□□□□ 0.68
MS4A1P11836 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.31■□□□□ 0.68
MS4A1P11836 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC19.31■□□□□ 0.68
MS4A1P11836 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MS4A1P11836 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
MS4A1P11836 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC19.3■□□□□ 0.68
MS4A1P11836 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MS4A1P11836 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.3■□□□□ 0.68
MS4A1P11836 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MS4A1P11836 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.3■□□□□ 0.68
MS4A1P11836 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.3■□□□□ 0.68
MS4A1P11836 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.3■□□□□ 0.68
MS4A1P11836 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MS4A1P11836 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.3■□□□□ 0.68
MS4A1P11836 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MS4A1P11836 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC19.3■□□□□ 0.68
MS4A1P11836 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MS4A1P11836 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 AC023090.2-201ENST00000625182 2110 ntBASIC19.3■□□□□ 0.68
MS4A1P11836 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MS4A1P11836 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC19.29■□□□□ 0.68
MS4A1P11836 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.29■□□□□ 0.68
MS4A1P11836 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
MS4A1P11836 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC19.29■□□□□ 0.68
MS4A1P11836 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.29■□□□□ 0.68
MS4A1P11836 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MS4A1P11836 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 GIMAP3P-201ENST00000495150 836 ntBASIC19.29■□□□□ 0.68
MS4A1P11836 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.29■□□□□ 0.68
MS4A1P11836 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 LINC02560-201ENST00000596379 459 ntBASIC19.29■□□□□ 0.68
MS4A1P11836 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC19.29■□□□□ 0.68
MS4A1P11836 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC19.29■□□□□ 0.68
MS4A1P11836 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MS4A1P11836 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC19.29■□□□□ 0.68
MS4A1P11836 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MS4A1P11836 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC19.29■□□□□ 0.68
MS4A1P11836 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MS4A1P11836 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC19.28■□□□□ 0.68
MS4A1P11836 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
MS4A1P11836 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.28■□□□□ 0.68
MS4A1P11836 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms