Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 BRWD1P1-201ENST00000401091 371 ntBASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 AC114812.1-204ENST00000449669 728 ntBASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 AL583810.1-201ENST00000553344 1045 ntBASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 AC010328.2-201ENST00000597698 1111 ntBASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMIGD3P0DMS9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TMIGD3P0DMS9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 MROH4P-201ENST00000431302 1578 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 FAM86MP-201ENST00000340703 885 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 RNU1-114P-201ENST00000365297 166 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 KLF2P2-201ENST00000416807 1039 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AC026954.1-201ENST00000429771 1293 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AL355994.2-201ENST00000447882 704 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AC138951.2-201ENST00000623455 1161 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 AC140479.7-201ENST00000636301 2332 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 GRK6P1-201ENST00000400595 1711 ntBASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMIGD3P0DMS9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms