Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 FKBP4P6-201ENST00000457486 1332 ntBASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AC004945.1-201ENST00000416738 983 ntBASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AC004466.1-201ENST00000599515 1080 ntBASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AL023803.2-201ENST00000620080 638 ntBASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AP003680.1-201ENST00000598970 3660 ntBASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 AC009090.5-201ENST00000624886 2285 ntBASIC14.15□□□□□ -0.14
RAB40ALP0C0E4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 AC087481.3-201ENST00000602886 1894 ntBASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 OR2I1P-209ENST00000641730 5365 ntBASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 SLC25A24P2-201ENST00000415059 510 ntBASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 FNTAP2-201ENST00000430308 634 ntBASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 SERPINA13P-202ENST00000478994 924 ntBASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 AC100850.1-201ENST00000506768 649 ntBASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms