Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC6P09630 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC6P09630 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXC6P09630 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC6P09630 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.76■□□□□ 0.27
HOXC6P09630 MIR4649-201ENST00000582839 64 ntBASIC16.76■□□□□ 0.27
HOXC6P09630 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC6P09630 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC6P09630 LINC01165-201ENST00000445190 1623 ntBASIC16.76■□□□□ 0.27
HOXC6P09630 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 AC112693.3-201ENST00000624819 1983 ntBASIC16.76■□□□□ 0.27
HOXC6P09630 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC6P09630 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HOXC6P09630 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC6P09630 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HOXC6P09630 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HOXC6P09630 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HOXC6P09630 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HOXC6P09630 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HOXC6P09630 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HOXC6P09630 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HOXC6P09630 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HOXC6P09630 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HOXC6P09630 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HOXC6P09630 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 MIR557-201ENST00000385239 98 ntBASIC16.75■□□□□ 0.27
HOXC6P09630 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.75■□□□□ 0.27
HOXC6P09630 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.75■□□□□ 0.27
HOXC6P09630 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.75■□□□□ 0.27
HOXC6P09630 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC6P09630 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HOXC6P09630 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 NDUFS6P1-201ENST00000485187 316 ntBASIC16.75■□□□□ 0.27
HOXC6P09630 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
HOXC6P09630 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HOXC6P09630 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXC6P09630 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HOXC6P09630 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXC6P09630 TMBIM7P-203ENST00000641617 1718 ntBASIC16.75■□□□□ 0.27
HOXC6P09630 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXC6P09630 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC6P09630 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXC6P09630 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
HOXC6P09630 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 AP000356.3-201ENST00000382243 753 ntBASIC16.74■□□□□ 0.27
HOXC6P09630 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HOXC6P09630 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HOXC6P09630 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.74■□□□□ 0.27
HOXC6P09630 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.74■□□□□ 0.27
HOXC6P09630 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.74■□□□□ 0.27
HOXC6P09630 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.74■□□□□ 0.27
HOXC6P09630 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.74■□□□□ 0.27
HOXC6P09630 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.74■□□□□ 0.27
HOXC6P09630 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
HOXC6P09630 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.74■□□□□ 0.27
HOXC6P09630 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.74■□□□□ 0.27
HOXC6P09630 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms